Publications

Found 44 results
2013
J. M. Good et al., “Comparative population genomics of the ejaculate in humans and the great apes”, Molecular biology and evolution, vol. 30, pp. 964-76, 2013.
J. A. Cahill et al., “Genomic evidence for island population conversion resolves conflicting theories of polar bear evolution”, PLoS genetics, vol. 9, p. e1003345, 2013.
S. H. Vohr and R. E. Green, “A mouse following in the footsteps of human prehistory”, Cell, vol. 152, pp. 667-8, 2013.
J. Abramyan et al., “The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage”, Genome biology, vol. 14, p. R28, 2013.
2012
H. A. Burbano et al., “Analysis of human accelerated DNA regions using archaic hominin genomes.”, PLoS ONE, vol. 7, pp. e32877–e32877, 2012.
M. Meyer et al., “A high-coverage genome sequence from an archaic Denisovan individual”, Science, vol. 338, pp. 222-6, 2012.
J. St John et al., “Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes.”, Genome Biol, vol. 13, p. 415, 2012.
2011
D. A. Earl et al., “Assemblathon 1: A competitive assessment of de novo short read assembly methods”, Genome research, 2011.
B. R. Graveley et al., “The developmental transcriptome of Drosophila melanogaster”, Nature, vol. 471, pp. 473-9, 2011.
J. M. Taliaferro, N. Alvarez, R. E. Green, M. Blanchette, and D. C. Rio, “Evolution of a tissue-specific splicing network”, Genes & development, vol. 25, pp. 608-20, 2011.
L. Abi-Rached et al., “The shaping of modern human immune systems by multiregional admixture with archaic humans”, Science, vol. 334, pp. 89-94, 2011.
F. W. Albert et al., “Targeted resequencing of a genomic region influencing tameness and aggression reveals multiple signals of positive selection”, Heredity, 2011.
2010
K. Prufer, U. Stenzel, M. Hofreiter, S. Paabo, J. Kelso, and R. E. Green, “Computational challenges in the analysis of ancient DNA”, Genome Biol, vol. 11, p. R47, 2010.
R. E. Green et al., “A draft sequence of the Neandertal genome”, Science, vol. 328, pp. 710-22, 2010.
D. Reich et al., “Genetic history of an archaic hominin group from Denisova Cave in Siberia”, Nature, vol. 468, pp. 1053-60, 2010.
N. Rohland et al., “Genomic DNA sequences from mastodon and woolly mammoth reveal deep speciation of forest and savanna elephants”, PLoS biology, vol. 8, p. e1000564, 2010.
H. A. Burbano et al., “Targeted investigation of the Neandertal genome by array-based sequence capture”, Science, vol. 328, pp. 723-5, 2010.
2009
D. Haussler et al., “Genome 10K: A Proposal to Obtain Whole-Genome Sequence for 10 000 Vertebrate Species”, Journal of Heredity, vol. 100, pp. 659-674, 2009.
M. Blanchette et al., “Genome-wide analysis of alternative pre-mRNA splicing and RNA-binding specificities of the Drosophila hnRNP A/B family members”, Mol Cell, vol. 33, pp. 438-49, 2009.
K. D. Hansen et al., “Genome-wide identification of alternative splice forms down-regulated by nonsense-mediated mRNA decay in Drosophila”, PLoS Genet, vol. 5, p. e1000525, 2009.
R. E. Green et al., “The Neandertal genome and ancient DNA authenticity”, The EMBO journal, vol. 28, pp. 2494-502, 2009.
A. W. Briggs et al., “Primer extension capture: targeted sequence retrieval from heavily degraded DNA sources”, J Vis Exp, p. 1573, 2009.
A. W. Briggs et al., “Targeted retrieval and analysis of five Neandertal mtDNA genomes”, Science, vol. 325, pp. 318-21, 2009.
2008
R. E. Green et al., “A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing”, Cell, vol. 134, pp. 416-26, 2008.
S. Myles, K. Tang, M. Somel, R. E. Green, J. Kelso, and M. Stoneking, “Identification and analysis of genomic regions with large between-population differentiation in humans”, Ann Hum Genet, vol. 72, pp. 99-110, 2008.

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